Bibliography for BS2150: Applications Of Molecular Genetics In Biology BETA

1.

Rowe G, Sweet M, Beebee TJC. An Introduction to Molecular Ecology. 3rd Edition. Oxford University Press; 2017.

2.

Brown TA. Genomes 3. 3rd ed. Garland Science; 2007.

3.

Brown TA. Genomes 4. Fourth edition. Garland Science; 2018.

4.

Nicholl DST. An Introduction to Genetic Engineering. 3rd Edition. Cambridge University Press; 2008.

5.

Nicholl DST. An Introduction to Genetic Engineering. 3rd Edition. Cambridge University Press; 2008. https://www-dawsonera-com.ezproxy01.rhul.ac.uk/abstract/9780511568053

6.

Primrose SB, Twyman RM. Principles of Gene Manipulation and Genomics. 7th Edition. Blackwell; 2006.

7.

Primrose SB, Twyman R. Principles of Gene Manipulation and Genomics. 7th Edition. Wiley; 2009. https://www-dawsonera-com.ezproxy01.rhul.ac.uk/abstract/9781444309096

8.

Strachan T, Read AP, Strachan T. Human Molecular Genetics. 4th Edition. Garland Science; 2011.

9.

Human Genome Announcement at the White House. Published online 2000. https://www.youtube.com/watch?v=slRyGLmt3qc

10.

UCSC Genome Browser Home. https://genome.ucsc.edu/

11.

EMBL-EBI Gene Ensembl. http://www.ensembl.org/index.html

12.

Home - Genome - NCBI. http://www.ncbi.nlm.nih.gov/genome/

13.

OMIM - Online Mendelian Inheritance in Man. http://www.omim.org/

14.

Erratum: Initial Sequencing and Analysis of the Human Genome. Nature. 2001;411(6838):720-720. doi:10.1038/35079657

15.

Venter JC. The Sequence of the Human Genome. Science. 2001;291(5507):1304-1351. doi:10.1126/science.1058040

16.

Grada A, Weinbrecht K. Next-Generation Sequencing: Methodology and Application. Journal of Investigative Dermatology. 2013;133(8):1-4. doi:10.1038/jid.2013.248

17.

Koch L. Genomics: Adding Another Dimension to Gene Regulation. Nature Reviews Genetics. 2015;16(10):563-563. doi:10.1038/nrg4007

18.

Chial H. Human Genome Project: Sequencing the Human Genome | Learn Science at Scitable. Nature Education. 2008;1(1):219-219. http://www.nature.com/scitable/topicpage/dna-sequencing-technologies-key-to-the-human-828

19.

Pyrosequencing Technology and Platform Overview - QIAGEN. https://www.qiagen.com/gb/resources/technologies/pyrosequencing-resource-center/technology-overview/

20.

The Pyrosequencing Reaction Cascade System. Published online 2014. https://www.youtube.com/watch?v=bNKEhOGvcaI

21.

International Service for the Acquisition of Agri-biotech Applications. http://www.isaaa.org/

22.

Schouten HJ, Krens FA, Jacobsen E. Cisgenic Plants Are Similar to Traditionally Bred Plants: International Regulations for Genetically Modified Organisms Should Be Altered to Exempt Cisgenesis. EMBO reports. 2006;7(8):750-753. doi:10.1038/sj.embor.7400769

23.

Espinoza C, Schlechter R, Herrera D, et al. Cisgenesis and Intragenesis: New Tools for Improving Crops. Biological Research. 2013;46(4):323-331. doi:10.4067/S0716-97602013000400003

24.

Ahmad P, Ashraf M, Younis M, et al. Role of Transgenic Plants in Agriculture and Biopharming. Biotechnology Advances. 2012;30(3):524-540. doi:10.1016/j.biotechadv.2011.09.006

25.

Recent Debate on GMOs | Standard Media. Published online 2015. http://www.standardmedia.co.ke/ktnhome/video/watch/2000097876/the-gmo-debate-continues

26.

James C. ISAAA Report on Global Status of Biotech/GM Crops. Published online 2014. https://www.isaaa.org/resources/publications/briefs/49/pptslides/pdf/B49-Slides-English.pdf

27.

Napier J, Tocher D. Alpha & Omega: Making Omega-3 Fish Oils in GM Camelina Plants.

28.

Klümper W, Qaim M. A Meta-Analysis of the Impacts of Genetically Modified Crops. PLoS ONE. 2014;9(11). doi:10.1371/journal.pone.0111629

29.

The Golden Rice Project. http://www.goldenrice.org/

30.

Gilbert N. Case Studies: A Hard Look at GM Crops. Nature. 2013;497(7447):24-26. doi:10.1038/497024a

31.

GMWatch Home. http://gmwatch.org/

32.

Greenpeace UK. http://www.greenpeace.org.uk/

33.

Soil Association. https://www.soilassociation.org/

34.

Anti-GMO Groups - United States | GMO Awareness. https://gmo-awareness.com/resources/anti-gmo-groups-america/

35.

Say NO to GM - Alliance for Natural Health International. http://anhinternational.org/campaign/say-no-to-gm/

36.

The Future of Food. http://www.thefutureoffood.com/About.html

37.

Klee HJ, Muskopf YM, Gasser CS. Cloning of an Arabidopsis Thaliana Gene Encoding 5-Enolpyruvylshikimate-3-Phosphate Synthase: Sequence Analysis and Manipulation to Obtain Glyphosate-Tolerant Plants. MGG Molecular & General Genetics. 1987;210(3):437-442. doi:10.1007/BF00327194

38.

Nussbaum RL, McInnes RR, Willard HF. Thompson & Thompson Genetics in Medicine. 8th Edition. Elsevier; 2016.

39.

Nussbaum RL, McInnes RR, Willard HF. Thompson & Thompson Genetics in Medicine. https://ebookcentral.proquest.com/lib/rhul/detail.action?docID=2074362

40.

Kaltenboeck B, Wang C. Advances in Real‐Time PCR: Application to Clinical Laboratory Diagnostics. Advances in Clinical Chemistry. 2005;40:219-259. doi:10.1016/S0065-2423(05)40006-2

41.

Rahman MM, Wong KK, Alfizah H, Hussin S, Isahak I. Influenza and Respiratory Syncytial Viruses: Efficacy of Different Diagnostic Assays. Pakistan Journal of Medical Sciences. 1969;31(4):791-794. doi:10.12669/pjms.314.7003

42.

Guidance for Clinicians on the Use of RT-PCR and Other Molecular Assays for Diagnosis of Influenza Virus Infection | Health Professionals | Seasonal Influenza (Flu). http://www.cdc.gov/flu/professionals/diagnosis/molecular-assays.htm

43.

Williamson SJ, Allen LZ, Lorenzi HA, et al. Metagenomic Exploration of Viruses Throughout the Indian Ocean. PLoS ONE. 2012;7(10). doi:10.1371/journal.pone.0042047

44.

Istrail S, Sutton GG. Whole-Genome Shotgun Assembly and Comparison of Human Genome Assemblies. Proceedings of the National Academy of Sciences of the United States of America. 2004;101(7):1916-1921. http://www.jstor.org/stable/3371370?seq=1#page_scan_tab_contents

45.

What Are Genome-Wide Association Studies? - Genetics Home Reference. https://ghr.nlm.nih.gov/primer/genomicresearch/gwastudies

46.

Cai N. Sparse Whole-Genome Sequencing Identifies Two Loci for Major Depressive Disorder. Nature. 2015;523(7562):588-591. doi:10.1038/nature14659

47.

Durbin RM. A Map of Human Genome Variation From Population-Scale Sequencing. Nature. 2010;467(7319):1061-1073. doi:10.1038/nature09534

48.

Brown TA. Molecular Phylogenetics. In: Genomes 3. 3rd Edition. Garland Science; 2007:609-620.

49.

Wang Z, Gerstein M, Snyder M. RNA-Seq: A Revolutionary Tool for Transcriptomics. Nature Reviews Genetics. 2009;10(1):57-63. doi:10.1038/nrg2484

50.

Tovar J, Fischer A, Clark CG. The Mitosome, a Novel Organelle Related to Mitochondria in the Amitochondrial Parasite Entamoeba Histolytica. Molecular Microbiology. 1999;32(5):1013-1021. doi:10.1046/j.1365-2958.1999.01414.x

51.

Regoes A, Zourmpanou D, León-Avila G, van der Giezen M, Tovar J, Hehl AB. Protein Import, Replication, and Inheritance of a Vestigial Mitochondrion. Journal of Biological Chemistry. 2005;280(34):30557-30563. doi:10.1074/jbc.M500787200

52.

Leger MM, Kolisko M, Kamikawa R, et al. Organelles That Illuminate the Origins of Trichomonas Hydrogenosomes and Giardia Mitosomes. Nature Ecology & Evolution. 2017;1(92). doi:10.1038/s41559-017-0092

53.

Betts HC, Puttick MN, Clark JW, Williams TA, Donoghue PCJ, Pisani D. Integrated Genomic and Fossil Evidence Illuminates Life’s Early Evolution and Eukaryote Origin. Nature Ecology & Evolution. 2018;2(10):1556-1562. doi:10.1038/s41559-018-0644-x

54.

Jedelský PL, Doležal P, Rada P, et al. The Minimal Proteome in the Reduced Mitochondrion of the Parasitic Protist Giardia intestinalis. PLoS ONE. 2011;6(2). doi:10.1371/journal.pone.0017285

55.

Martincová E. Probing the Biology of Giardia intestinalis Mitosomes Using In Vivo Enzymatic Tagging [open access]. Molecular and Cellular Biology. 2015;35(16):2864-2874. https://mcb.asm.org/content/35/16/2864.long

56.

Voleman L. Giardia Intestinalis Mitosomes Undergo Synchronized Fission but Not Fusion and Are Constitutively Associated With the Endoplasmic Reticulum. BMC Biology. 2017;15(1). doi:10.1186/s12915-017-0361-y

57.

Rowe G, Sweet M, Beebee T. Mutation Rates. In: An Introduction to Molecular Ecology. Third edition. Oxford University Press; 2017.

58.

Rowe G, Sweet M, Sweet T. mtDNA and rRNA. In: An Introduction to Molecular Ecology. Third edition. Oxford University Press; 2017.

59.

Rowe G, Sweet M, Beebee T. Microsatellites. In: An Introduction to Molecular Ecology. Third edition. Oxford University Press; 2017.

60.

Brown TA. Replication Slippage. In: Genomes 3. 3rd Edition. Garland Science; 2007:511-511.

61.

Rowe G, Sweet M, Beebee T. Identifying Relatives in Behavioural Ecology. In: An Introduction to Molecular Ecology. Third edition. Oxford University Press; 2017.

62.

Leadbeater E, Carruthers JM, Green JP, Rosser NS, Field J. Nest Inheritance Is the Missing Source of Direct Fitness in a Primitively Eusocial Insect. Science. 2011;333(6044):874-876. doi:10.1126/science.1205140

63.

Rowe G, Sweet M, Beebee T. Assignment Tests. In: An Introduction to Molecular Ecology. Third edition. Oxford University Press; 2017.

64.

Gunn A. DNA Profiling. In: Essential Forensic Biology. 2nd Edition. Wiley-Blackwell; 2008:88-91.

65.

Brown TA. Microarrays. In: Genomes 3. 3rd Edition. Garland Science; 2007:169-175.

66.

The Genetics of Society | The Scientist Magazine. http://www.the-scientist.com/?articles.view/articleNo/41704/title/The-Genetics-of-Society/

67.

Tovar J, Wilkinson S, Mottram JC, Fairlamb AH. Evidence That Trypanothione Reductase Is an Essential Enzyme in Leishmania by Targeted Replacement of the Trya Gene Locus. Molecular Microbiology. 1998;29(2):653-660. doi:10.1046/j.1365-2958.1998.00968.x

68.

Krieger S. Trypanosomes Lacking Trypanothione Reductase Are Avirulent and Show Increased Sensitivity to Oxidative Stress. Molecular Microbiology. 2002;35(3):542-552. doi:10.1046/j.1365-2958.2000.01721.x

69.

Jones NG, Catta-Preta CMC, Lima APCA, Mottram JC. Genetically Validated Drug Targets in Leishmania: Current Knowledge and Future Prospects. ACS Infectious Diseases. 2018;4(4):467-477. doi:10.1021/acsinfecdis.7b00244

70.

Wright MH. Validation of N-Myristoyltransferase as an Antimalarial Drug Target Using an Integrated Chemical Biology Approach. Nature Chemistry. 2014;6(2):112-121. doi:10.1038/nchem.1830

71.

Schlott AC, Holder AA, Tate EW. Myristoylation as a Drug Target in Malaria: Exploring the Role of                            -Myristoyltransferase Substrates in the Inhibitor Mode of Action. ACS Infectious Diseases. 2018;4(4):449-457. doi:10.1021/acsinfecdis.7b00203

72.

Wang Z, Gerstein M, Snyder M. RNA-seq: A Revolutionary Tool for Transcriptomics. Nature Reviews Genetics. 2009;10(1):57-63. doi:10.1038/nrg2484

73.

Rowe G, Sweet M, Beebee T. DNA Barcoding. In: An Introduction to Molecular Ecology. Third edition. Oxford University Press; 2017.

74.

Rowe G, Sweet M, Beebee T. Prey ID. In: An Introduction to Molecular Ecology. Third edition. Oxford University Press; 2017.

75.

Freeland JR, Kirk H, Petersen S. Predators and Prey. In: Molecular Ecology. 2nd Edition. Wiley-Blackwell; 2011:309-313.

76.

Freeland JR, Kirk H, Petersen S. Predators and Prey. In: Molecular Ecology. 2nd ed., 1st impression. Wiley-Blackwell; 2011:309-313. doi:10.1002/9780470979365.ch7

77.

Urwin R, Maiden MCJ. Multi-Locus Sequence Typing: A Tool for Global Epidemiology. Trends in Microbiology. 2003;11(10):479-487. doi:10.1016/j.tim.2003.08.006

78.

Strachan T, Read AP, Strachan T. Genetic Mapping of Mendelian Characters. In: Human Molecular Genetics. 4th Edition. Garland Science; 2011:441-467.

79.

Strachan T, Read AP, Strachan T. Mapping Genes Conferring Susceptibility to Complex Diseases. In: Human Molecular Genetics. 4th Edition. Garland Science; 2011:467-493.

80.

Strachan T, Read AP, Strachan T. Identifying Human Disease Genes and Susceptibility Factors. In: Human Molecular Genetics. 4th Edition. Garland Science; 2011:497-536.

81.

Slatkin M. Linkage Disequilibrium - Understanding the Evolutionary Past and Mapping the Medical Future. Nature Reviews Genetics. 2008;9(6):477-485. doi:10.1038/nrg2361

82.

Lander ES. Initial Impact of the Sequencing of the Human Genome. Nature. 2011;470(7333):187-197. doi:10.1038/nature09792

83.

Strachan T, Read AP, Strachan T. Genetic Approaches to Treating Disease. In: Human Molecular Genetics. 4th Edition. Garland Science; 2011:677-718.

84.

Escors D, Breckpot K. Lentiviral Vectors in Gene Therapy: Their Current Status and Future Potential. Archivum Immunologiae et Therapiae Experimentalis. 2010;58(2):107-119. doi:10.1007/s00005-010-0063-4

85.

Hoffman EP, Bronson A, Levin AA, et al. Restoring Dystrophin Expression in Duchenne Muscular Dystrophy Muscle. The American Journal of Pathology. 2011;179(1):12-22. doi:10.1016/j.ajpath.2011.03.050

86.

Chun YS, Byun K, Lee B. Induced Pluripotent Stem Cells and Personalized Medicine: Current Progress and Future Perspectives. Anatomy & Cell Biology. 2011;44(4):245-255. doi:10.5115/acb.2011.44.4.245

87.

Kindt TJ, Osborne BA, Goldsby RA, Kuby J. Immunology. 6th ed. W. H. Freeman; 2007.

88.

Sadanand S. Vaccination: The Present and the Future. Yale Journal Of Biology And Medicine. Published 2011. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3238332/

89.

‘Different Types of Vaccines’ on History of Vaccines Website. http://www.historyofvaccines.org/content/articles/different-types-vaccines

90.

‘Types of Vaccines’ on History of Vaccines Website. http://www.historyofvaccines.org/content/types-vaccines

91.

‘The Human Immune System and Infectious Disease’ on History of Vaccines Website. http://www.historyofvaccines.org/content/articles/human-immune-system-and-infectious-disease

92.

‘The Future of Immunization’ on History of Vaccines Webvsite. http://www.historyofvaccines.org/content/articles/future-immunization

93.

‘The Development of HIV Vaccines’ on History of Vaccines Website. http://www.historyofvaccines.org/content/articles/development-hiv-vaccines

94.

Boseley S. ‘First British volunteer injected with trial Ebola vaccine in Oxford’ on The Guardian Website. Published 2014. https://www.theguardian.com/society/2014/sep/17/ruth-atkins-first-british-volunteer-injected-trial-ebola-vaccine-oxford

95.

Daniell H, Singh ND, Mason H, Streatfield SJ. Plant-Made Vaccine Antigens and Biopharmaceuticals. Trends in Plant Science. 2009;14(12):669-679. doi:10.1016/j.tplants.2009.09.009

96.

Small JC, Ertl HCJ. Viruses - From Pathogens to Vaccine Carriers. Current Opinion in Virology. 2011;1(4):241-245. doi:10.1016/j.coviro.2011.07.009

97.

Serruto D, Rappuoli R. Post-Genomic Vaccine Development. FEBS Letters. 2006;580(12):2985-2992. doi:10.1016/j.febslet.2006.04.084

98.

Daniell H, Singh ND, Mason H, Streatfield SJ. Plant-Made Vaccine Antigens and Biopharmaceuticals. Trends in Plant Science. 2009;14(12):669-679. doi:10.1016/j.tplants.2009.09.009

99.

Small JC, Ertl HCJ. Viruses From Pathogens to Vaccine Carriers. Current Opinion in Virology. 2011;1(4):241-245. doi:10.1016/j.coviro.2011.07.009